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He is a member of IEEE, a computer scientist, an Information Technologist, and a Research Lab Head at the Dig Connectivity Research Laboratory (DCRLab), Kampala, Uganda. My research broadly integrates and focuses on developing principled computationally and statistically efficient models and algorithms for various machine learning problems in Smart Agriculture, Ecological Informatics, Computer Vision, Applied AI, Cybersecurity and Privacy, and Smart Cities. I attained a Bachelor in Information Technology at the Faculty of Science & Computing, Ndejje University, Kampala, Uganda; a Master in Information Technology Engineering (Computer and Communication Networks); and PhD in Computer Science Universiti Brunei Darussalam, Brunei. He has received additional training from, among others, the National Institutes of Health, US Department of Health and Human Services, and the Bloomberg School of Public Health, USA. Hundreds of scholarly publications, including those in prestigious peer-reviewed journal articles, numerous IEEE International, non-IEEE Conference proceedings, book chapters, and books have been published. Reviewer/editorial support of over twelve (Scopus, Compendex (Elsevier Engineering Index), and WoS International Journals, including Expert Systems With Applications, Scientific Reports and Computers and Electronics in Agriculture. I served in several capacities, including being departmental support for Mathematics for Data Science, Advanced Topics in Computing, and Advanced Algorithms. Prior to this, I served as a community data officer at Pace-Uganda, a research associate at TechnoServe, a research assistant at PSI-Uganda, a research lead at the Socio-economic Data Centre (SEDC-Uganda) and ag. managing director at Asmaah Charity Organisation.
Computer Vision, Artificial Intelligence, Security and Privacy, Smart Agriculture / Digital Agriculture, Health Computing, Digital Image Processing,
Social Networks Analysis, Sustainable Computing, Ecological Informatics, Smart Computing
1987-1989: assistant professor at the Neuchâtel University (Switzerland)
1990-2001: full professor at the Neuchâtel University (Switzerland): artificial intelligence & software engineering
2001- : senior researcher at CIRAD in the unit “Gestion des Ressources et Environnement” (GREEN) and from 2021 “Savoirs ENvironnement Sociétés” (UMR SENS)
Former professor at the University of Neuchatel in Switzerland and now senior researcher at CIRAD in France, I am doing research on artificial intelligence since 1984. Having begun with logic programming, I naturally applied logics and its extensions (i.e. modal logics of various sorts) to specify agent behaviour. Since 1987, I moved both to embedded intelligence (using mobile robots) and multi-agent systems applied, in particular, to job-shop scheduling and complex system simulation and design. Since 2001, I exclusively work on modelling and simulation of socio-ecosystems in a multidisciplinary team on renewable resources management (GREEN). I am focusing on modelling complex systems in a multi-disciplinary (economist, agronomist, sociologists, geographers, etc.) and multi-actor (stakeholders, decision makers) setting. It includes:
- representing multiple points of view at various scales and levels on a complex socio-ecosystem, using ontologies and contexts
- representing the dynamics of such systems in a variety of formalisms (differential equations, automata, rule-based systems, cognitive models, etc.)
- mapping these representations into a simulation formalism (an extension of DEVS) for running experiments and prospective analysis.
This research is instantiated within a modelling and simulation platform called MIMOSA (http://mimosa.sourceforge.net). The current applications are the assessment of the sustainability of management transfer to local communities of the renewable ressources and the dynamics of agro-biodidversity through networked exchanges.
As of my incorporation into the Department of Computer Architecture and Operating Systems of the UAB as a postgraduate student, it is possible to divide my scientific-technical career into the following stages:
Simulation of Parallel Applications (1992-99): Focused on the design and development of simulators of parallel applications. This research main objective was the definition of abstractions for parallel programs, based on characterizing tasks and their dependences. Two main abstractions were developed, at first a simpler one, which was easier to parametrize, and, next, a more complex an accurate one. Using these characterizations, several simulation tools were programmed and used in the context of national and European projects. As part of my Master’s thesis, I was involved in the design and development of some of these simulation applications.
National projects: 4, European: 2
International conferences: 3, National: 1, Journal papers: 3
Security in Distributed Systems (2007-12): Focused on the design and development of the FPVA (First Principles Vulnerability Assessment) methodology for the evaluation of vulnerabilities in Grid applications. This methodology clearly defined a set of steps for the assessment of Grid applications vulnerabilities, most of these steps could be automatized or at least supported by specific tools. Jointly with other professors of our group and from the University of Wisconsin, I was involved in the original definition and application of this methodology.
International projects: 2
Master Thesis: 1, Ph.D. Thesis: 1
International conferences: 2, National: 1, Journal papers: 2
Parallel Application Modeling (1999-present): This is my main line of research, aimed at defining high-level performance models for parallel applications. Initially, models were defined for MPI applications with a master-worker and pipeline structure, but later this line has been expanded with the definition of models for memory-intensive OpenMP applications, composed (mix of several structures) applications, applications based on mathematical libraries, distributed data-intensive applications and, finally, applications based on the simulation of agents (ABS) with SPMD structure.
As a result of the work on modeling the performance of ABS parallel systems, we have opened a new line for the definition and implementation of a benchmark for assessing the performance of the parallel simulators generated by well-known platforms, such as FLAME, Repast-HPC or D-Mason. In addition, the knowledge we have gained on this topic has opened new ways of collaboration for optimizing real parallel ABS in the health sciences area (tumor growth and infection spread).
National projects: 12, European: 1
International conferences: 17, National: 4, Journal papers: 11
International Presentations: 4
Parallel Applications Tuning Tools (2010-present): Focused on the design and development of tools for automatic tuning and, in some cases, also dynamic tuning of parallel applications. These tools allow the integration of performance models in the form of external components provided by the analyst. For this reason, this research line is tightly coupled with the Parallel Application Modeling one. The two main tools developed totally or partially by our group are Monitoring Analysis and Tuning Environment-MATE (and its highly scalable evolution ELASTIC) and Periscope Tuning Framework-PTF.
National projects: 2, European: 1
International conferences: 11, Journal papers: 2
Tools: MATE, ELASTIC, PTF
International Presentations: 5
Anna Sikora is an Associate Professor in the Computer Architecture and Operating System Department at Autonomous University of Barcelona (UAB).
She got the BS degree in computer science in 1999 from Technical University of Wroclaw (Poland). She got the MSc in computer science in 2001 and in 2004 the PhD in computer science, both from Autonomous University of Barcelona (Spain).
Since 1999 her investigation is related to parallel and distributed computing. Her current main interests are focused on high performance parallel applications, performance models, automatic performance analysis and dynamic tuning. She has been involved in programming tools for automatic and dynamic performance tuning on cluster and Grid environments, as well as in exa-scale systems.
High performance parallel computing, parallel applications, performance models, automatic performance analysis, dynamic tuning. Performance tools for automatic and dynamic performance tuning on HPC systems. Agent-based modelling systems.
Dissertation: Narrative Generation for Agent-Based Models
Abstract: This dissertation proposes a four-level framework for thinking about having agent-based models (ABM) generate narrative describing their behavior, and then provides examples of models that generate narrative at each of those levels. In addition, “interesting” agents are identified in order to direct the attention of researchers to the narratives most likely to be worth spending their time reviewing. The focus is on developing techniques for generating narrative based on agent actions and behavior, on techniques for generating narrative describing aggregate model behavior, and on techniques for identifying “interesting” agents. Examples of each of these techniques are provided in two different ABMs, Zero-Intelligence Traders (Gode & Sunder, 1993, 1997) and Sugarscape (Epstein & Axtell, 1996).
Agent-based modeling and simulation of public policies.
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