Computational Model Library

Population Genetics (2.1.0)

This model simulates how the mechanisms of biological evolution (genetic drift, gene flow, mutation, and natural selection) shape emergent evolutionary patterns. That is, how allele frequencies change in a population over generations and shape patterns of between- and within-population variation.

During a simulation, “students” control populations of fish via a HubNet Client and a “teacher” controls the environment via the HubNet Control Center. Teachers can set up to four alleles at the locus coding for color. A fish’s color phenotype is based on its genotype and the allele relationship set by parameters (i.e. dominant or recessive). The plots in the user interface show how the allele frequencies within and between populations change over generations.

PopulationGenetics-view-3.png

Release Notes

Version 2.1.0 includes minor interface updates and additional allele color options: green, white and black. Modified controls so that HubNet is optional instead of default. Created with NetLogo 6.1.1.

Associated Publications

Dung, S. K., López, A., Barragan, E. L., Reyes, R. J., Thu, R., Castellanos, E., Catalan, F., Huerta-Sánchez, E. & Rohlfs, R. V. (2019). Illuminating Women’s Hidden Contribution to Historical Theoretical Population Genetics. Genetics, 211(2), 363-366.

Population Genetics 2.1.0

This model simulates how the mechanisms of biological evolution (genetic drift, gene flow, mutation, and natural selection) shape emergent evolutionary patterns. That is, how allele frequencies change in a population over generations and shape patterns of between- and within-population variation.

During a simulation, “students” control populations of fish via a HubNet Client and a “teacher” controls the environment via the HubNet Control Center. Teachers can set up to four alleles at the locus coding for color. A fish’s color phenotype is based on its genotype and the allele relationship set by parameters (i.e. dominant or recessive). The plots in the user interface show how the allele frequencies within and between populations change over generations.

Release Notes

Version 2.1.0 includes minor interface updates and additional allele color options: green, white and black. Modified controls so that HubNet is optional instead of default. Created with NetLogo 6.1.1.

Version Submitter First published Last modified Status
2.1.0 Kristin Crouse Wed Sep 9 03:31:32 2020 Thu Dec 5 06:37:08 2024 Published Peer Reviewed DOI: 10.25937/8awx-bp23
2.0.0 Kristin Crouse Mon Feb 24 17:26:22 2020 Thu Dec 5 06:36:48 2024 Published Peer Reviewed DOI: 10.25937/8xq0-x216
1.0.0 Kristin Crouse Thu Feb 8 22:07:51 2018 Fri Feb 21 10:20:44 2020 Published

Discussion

This website uses cookies and Google Analytics to help us track user engagement and improve our site. If you'd like to know more information about what data we collect and why, please see our data privacy policy. If you continue to use this site, you consent to our use of cookies.
Accept